Hehe. Chef's Chocolate Salty Balls might be causing the problem.

Actually I had similar sync problems before, and flashing an Empeg standard kernel did solve the problems. I can sometimes get syncs to work okay with Hijack, but for larger (hundreds of megs)syncs, I flash a stock kernel, do the sync, and re-flash Hijack. Takes some time but it's safer.
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- Tony C
my empeg stuff