My first inclination in this thread was to question the workspace. IMO, that will effect carpal tunnel far more than the type of pointing device.
There's only so much work can do in the short term. Our office is organised into banks of straight desks. This means that they're all the same height and shape.
Personally, I think the desk is slightly too low, and I prefer a curved desktop, but I need to explore easier options first.
A track pad won't, by itself, be a panacea, but being able to choose one or the other might help.
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